Topology Independent Comparison of Biomolecular 3D Structures

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Structure Alignment 1 of 3vea and 1ysaABCD

Structure Overlap
RMSD
Fragment Score
Topology Score
# CA , C3' atoms of 3vea
# CA , C3' atoms of 1ysaABCD
Match Size
#Identical Residues
#Identical Residues with Heuristics
75.90%
1.81
0.87
0.58
344
83
63
18
19

CLICK Alignment

                        10        20                                          10                             10                               
3vea       80B:ATRMKQTIRARRKRHFNAE-H:99B    105B:K---SID:108B     2N:GTTCGTGACATTGTCACG:19N      5M:CGTGACAATGTCACGAA:21M    109A:LE-F-L:112A 
1ysaABCD  230D:LKRARNTEAARRSRARKLQRM:250D   243C:RSRRAAE:237C     3A:CC-TATGACTCATCCAGT:19A     24B:CTGGA-TGAGTCATAGG:39B    244C:A-RKLQ:248C 

Alignment 1 in PIR format Matched residue pairs 1 Superimposed structures 1

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