Topology Independent Comparison of Biomolecular 3D Structures

Introduction

Algorithm

Benchmark

Examples

Run CLICK

Download

References

Contacts

Help

Structure Alignment 1 of 2wt7 and 1ysaABCD

Structure Overlap
RMSD
Fragment Score
Topology Score
# CA , C3' atoms of 2wt7
# CA , C3' atoms of 1ysaABCD
Match Size
#Identical Residues
#Identical Residues with Heuristics
85.54%
1.51
1.00
0.29
185
83
71
34
34

CLICK Alignment

                        10        20                      10        20                          10                            10           
2wt7      142A:IRRERNKMAAAKCRNRRRELT:162A   241B:Q-KRRT-LKNRGYAQSCRYK-RVQQ:262B     1C:AAT-TGCTGACTCATAG:16C      1D:CTATGAGTCAGCAATT:16D  
1ysaABCD  230D:LKRARNTEAARRSRARKLQRM:250D   228C:AALK-RAR-NTEAARRSRARKL-QR:249C    23B:ACTGG-ATGAGTCATAG:38B      4A:CTATGACTCATCCAGT:19A  

Alignment 1 in PIR format Matched residue pairs 1 Superimposed structures 1

[back to top]