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Structure Alignment of 4v88A2 and 4v54AA (Note: If JSmol does not show the alignment, please refresh this page by F5)
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Alignment |
10 20 30 40 50 60 70 80 10 20 30 40 50 10 20 10 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 10 20 10 20 30 40 50 60 70 80 90 100 110 120 10 20 30 10 20 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 10 20 30 40 50 60 70 80 90 10 20 10 10 20 30 40 50 60 70 80 10 20 30 40 50 60 70 10 10 10 20 30 40 50 60 10 10 20 30 40 50
4v88A2 12:UAUCUGGUUGAUCCUGCCAGUAGUCAU-A-UG-CUUGUCUCAAAGA-U-U-AAGCCAUGCAUGUCU-A-AGUA-U-AA-G--CAA:722 812:GUGA-AACUGCGAAUGGCUC-AUUAA-AUCAGUUAU-CGUUUAUUUGAUA:1262 1452:AU-A:1472 1552:UAAU-UCUAG-A-G-C-UAAUAC:1722 2042:GU-A-U--UU:2092 2672:UCG-CAU:2722 2842:GGCGAUGGUUCAUUCAAAUUU-C-UGCCCUAU-CA-A-CUUUCG-AUGGUAGGAUAGUGGCCUACCAUGGUUUCAA---CGG-G--UAACGGGGAAU-AA-GGGUUCGA-U-UCCGGAGAGG-GAGCCUGAGAAACGGCUACCACA-UCCAAGGAAGGCAGCAGG-CG-CGCA-AAUUACCCAAUCCUAAUU-CAGGGAGGUAGUG-ACAAUAAAU-AAC:4792 5042:UA-A-U--UGGAAUGA-GUACA:5202 5252:AA--AU-A-C-CUUAAC-G-AG-G-AACAA-UUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUA-UAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACU:6382 7452:UACUUUGAAA-AAAUUAGAGUG-UUCAAAGC:7732 7882:AAUAUA-UUAGCAUGGAAUAAUA:8092 8612:UAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAGAGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGAAAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUG:10532 10662:CCCACUCGGCACCU-UACGAGAAAUCA--AAGUC-UUUGGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCA-CC:11592 11622:CA-GG:11652 11712:AGC-CU-G-C-G-GC-UUAA:11842 11972:CGG-G-G-A-A-A:12042 12662:UGG:12682 12752:AU-G---GCC-GUUCU-UAGUUG-GUGGAGUGAUUUGU-CUGCUUAAUUGCGAUAACGAACGAGACCUUAA--CCU-A-CUAA:13452 13822:AGA-G-G-G-AC-UAU-CGGUUUCAAGCC-GAUGGAA-G--UUUGA-GGCAAUAACA-G-G-UCU-G-UG:14352 14472:CGU-UC:14512 14612:CGC:14632 14872:A-GUCUA-AC:14942 15092:CUUGGUAA-UC:15182 15802:CCUAGU:15852 16242:CCUUUGUACACACCGCCCGUCGCUAGUACCGAUU-G-AAUGG-C-U-UAGUGAGGCCU--CA-GGA:16812 17222:AUUUGG-A-CAAACUU:17352 17422:UUAGAGGAACUAA-A-AGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGA:17942
4v54AA 6A:GAAGAGUUUGAUCAUGGCUCAGAU-U-G-AACGCUGGCGGCAGGC-C-U-AA-CACAUGCAAGUC-G-A-AC-G-GU-A-ACAGG:76A 96A:UGACGAGUGGCGGACGGGUGAGU-A-AUGUCUGGG-A-AACUGCCUGAUG:141A 149A:AUAA:152A 160A:A-A-A-CGG-U-A-G-CUAAUAC:175A 181A:A-A-C-GUCG:187A 198A:GAGGGGG:204A 215A:CUCUUGCCAUCGGAUGUGCC-C-AGAUGGGAUUA-G-C-UA--GUAG-GUGGGGUAACGGCUCACCUAGGC----GACGAU-C-CCU-AGCUGGUCUGA-G-AGGAUG-A-CCAGCCACACUGG-AACUGAGACACGGUCCAGA-CUCCUACGGGAGGCAGCAGUGG-G-GA-AUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAU-GCCGCG-UGUA:408A 428A:G-U-A-AAGUACUUU-CAGCGG:445A 481A:G-ACG-U-U-ACCCGC-A-GA-A-G--AA-GC-ACCGGCUAAC-UCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAU-CGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUU:591A 596A:AGUCAGAUGUGAAAUCCCCGG-GCUCAACCU:625A 626A:GGGAACUG-CAUCUGAUACUGGC:647A 651A:CUU-GAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCU:842A 845A:AGGCGUGGCUUCC-GG-AGCUAACGCGUUAAGU-C----GACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCC-G-C:934A 1377A:A-UAA:1374A 1237A:CA-UC-G-U-G-CACAC--A:1225A 971A:GC-G-A-A-G-AA:978A 1047A:GGU:1049A 1054A:C-A-UGGCU-G-UCG-UCAGCUCGUGU-UGUGAAAUGUUGG-GUUAAGUCCCGCAACGAGCGCAACCCUU-AUCC-U-U---U:1123A 1152A:AG-G-A-G-A-CUGC-C-AGUGAUAAACUGG-AG-G-A-AGGU-GGGGAUGACGUC-A-A-G-U-C-AUC:1203A 984A:CAUUCC:979A 945A:GGU:943A 1253A:GAG---AAGC:1259A 1274A:AAG-CGG-A-C:1281A 1344A:CU---A:1346A 1387A:GCCUUGUACACACCGCCCGUCACACCAUGGGAG-U-G-GGU-U-G-CAAAAGAAGUA-GGU-AGCU:1444A 1460A:CGCUU-A-C-CACUUU:1472A 1479A:CAUGACUGGGGU-G-AAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGA:1531A |
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Structure Alignment of 4v88A2 and 4v54AA (Note: If JSmol does not show the alignment, please refresh this page by F5)
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Alignment |
10
4v88A2 15002:CCG-A-G-AGG:15072 15922:AAG:15942
4v54AA 1135A:UC-C-G-G--C:1140A 1250A:AAA:1252A |
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